CDS

Accession Number TCMCG007C18980
gbkey CDS
Protein Id XP_009132994.1
Location join(8471198..8471344,8471747..8471845,8471968..8472048,8472140..8472211,8472299..8472430,8472525..8472611,8472714..8472785,8472863..8472948,8473074..8473206,8473292..8473480,8473555..8473734)
Gene LOC103857539
GeneID 103857539
Organism Brassica rapa

Protein

Length 425aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009134746.3
Definition solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category H
Description Belongs to the FPP GGPP synthase family
KEGG_TC -
KEGG_Module M00366        [VIEW IN KEGG]
KEGG_Reaction R01658        [VIEW IN KEGG]
KEGG_rclass RC00279        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01006        [VIEW IN KEGG]
KEGG_ko ko:K14066        [VIEW IN KEGG]
EC 2.5.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00900        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004659        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006733        [VIEW IN EMBL-EBI]
GO:0006743        [VIEW IN EMBL-EBI]
GO:0006744        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009108        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042180        [VIEW IN EMBL-EBI]
GO:0042181        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050347        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901661        [VIEW IN EMBL-EBI]
GO:1901663        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTATTCACGAGGGGTATTTCTCGGATCTCTTCCAAGTTTCTGAGAAACCGCGGCTTCTCTCAGTCACTTCTCTCCTCTCACCGCCTCCTCGCAATCATTCCCGAGCTGGGTCACTCTTGTTCCGACTCTACTTCTACACACAAGGGTTACGTTTGCAGAGGTTCTACTTATTCATTCAAATCTCCAGTTTTTGGTGGTTTTGTACATCACCATCTCTATCACCAGAGCAGCTCAGTTGTTGAGGAGGAGCTTGACCCGTTTTCGCTTGTGGCTGATGAGTTGTCACTTCTTAGCAATAAGTTGAGAGCCATGGTAGTTGCCGAGGTTCCGAAGCTTGCTTCTGCGGCTGAATACTTCTTCAAAAGGGGTGTGGAAGGCAAACAGTTTCGTCCAACTATTTTGCTGTTGATGGCGACTGCTCTGAATGTACGTGTACCAGAAGCATTGGCTGCTGAATCAGCAGATGTAGTCTCATCAGAGTTACGTGTAAGGCAACGGGGTATTGCTGAAATCACCGAGATGATACATGTTGCAAGCCTACTGCATGATGATGTCTTAGATGATGCTGATACAAGGCGTGGTGTTGGTTCCTTAAACTTTGTAATGGGTAACAAGATATCGGTATTAGCAGGAGACTTTTTGCTTTCTCGGGCTTGTGTGGCTCTTGCTGCTCTTAAAAACACAGAGGTTGTATCGTTGCTTGCAACTGTTGTAGAACATCTTGTTACCGGTGAAACCATGCAAATGACTAGCACAACTGATCAGCGTCATAGTATGGACTACTATATGCAGAAGACGTATTATAAGACGGCATCACTAATCTCAAACAGCTGCAAAGCAGTTGCATTACTCGCTGGGCAATCAGCAGAAGTTGCCATGTTAGCTTTTGAATACGGGAAGAATCTGGGCTTGGCGTTCCAATTGATAGACGACGTTCTTGACTTCACCGGCACATCTGCGTCTCTAGGAAAGGGATCGTTATCAGACATCCGACATGGGATCATAACAGCTCCAATCCTGTTTGCCATGGAGGAGTTTCCTCAACTACGCAATGTTGTTGGTCAACTTGAAAAAGATCCAACGAACGTTGACATTGCTTTAGAGTATCTTGGGAAGAGCAATGGGATACAAAGGACAAGAGAGTTAGCTATGGAACATGCTAATCTCGCAGCAGCAGCAATTGGGTCTTTACCTGAAACAGACGATGAAGATGTCAAAAGATCGAGGCGGGCACTTATTGACTTGACACATAGAGTCATCACCAGAAACAAGTAA
Protein:  
MLFTRGISRISSKFLRNRGFSQSLLSSHRLLAIIPELGHSCSDSTSTHKGYVCRGSTYSFKSPVFGGFVHHHLYHQSSSVVEEELDPFSLVADELSLLSNKLRAMVVAEVPKLASAAEYFFKRGVEGKQFRPTILLLMATALNVRVPEALAAESADVVSSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNFVMGNKISVLAGDFLLSRACVALAALKNTEVVSLLATVVEHLVTGETMQMTSTTDQRHSMDYYMQKTYYKTASLISNSCKAVALLAGQSAEVAMLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRNVVGQLEKDPTNVDIALEYLGKSNGIQRTRELAMEHANLAAAAIGSLPETDDEDVKRSRRALIDLTHRVITRNK